This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000STMD.1

Tunisia/LOC_000STMD.1/2024
S. Fabi, G. Di Pietra, E. Valente, M. Bellato, C. Agostini, M. Paccagnella, E. Franchin, V. Chisu, C. Foxi, C. Del Vecchio, I. Castagliuolo, G. Masala & C. Salata

University of Padova, Molecular Medicine

Sample details

Collection date
2024
Earliest release date
2025-07-23
Sampling location
Tunisia
Isolate name
CCHFV/TUN/REM/2024/60B

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-26 12:45insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-07-23
INSDC accession S

Submission details

Submission ID
PV920624.1.S
Submitting group
Date submitted
2026-03-26 12:45:25 UTC
Date released
2026-03-26 13:01:38 UTC

Host

Host

Lineage

Segment S Lineage
I

Files

Annotations

Alignment and QC

Total SNPs S
103
Length S
585 (35%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T814G
  • G820A
  • C829G
  • G831A
  • T835C
  • G838C
  • G844A
  • T847C
  • G850A
  • C853T
  • A856G
  • T859A
  • T862C
  • G864A
  • A865G
  • A868C
  • C871T
  • C874T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:N258K
  • NP:G259E
  • NP:R270K
  • NP:I277V
  • NP:A285T
  • NP:S301G
  • NP:A307P
  • NP:Y311F
  • NP:T420S
Deletions
N/A
Insertions
N/A

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